Hosts, Super Sand Eagles, failed to impress as they lost their second group game against Cote d’ Ivoire on penalties.
It was a fierce battle as the regulation time ended four goals apiece before the Ivorians went on to beat Nigeria on penalties.
Ivory Coast tops Group A after edging Nigeria with six. points, while Nigeria and Egypt are placed second with three points respectively.
A double from the impressive Mohamed helped Egypt edge Ghana in a nine-goal thriller.
Meanwhile, Senegal are the first team to qualify for the semi-finals of the African Nations Cup Beach Soccer, following their 3-1 win over Madagascar.
Nigeria will on Thursday play their final group game against west African neighbours, Ghana.
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